Tray showcase

Overgrown Arabidopsis rosettes under challenging tray analysis.

This popup shows a full tray analysis where neighboring rosettes are touching, making instance separation, convex hull fitting, and trait attribution substantially harder than in clean benchmark trays.

3D-fusion analysis

20 segmented plants

8.7 mean leaves

Package D6C31469-FD54-47A8-AAA7-8ADB2B968B73

36,379.8Mean rosette area (px²)

0.108 mMean height

0.123 mMax height

0.004288 m²Mean canopy hull area

20Segmented plants

3D + LiDARProjected support and camera poses

Selected RGB Frame

The tray frame used as the visual base for the fused Arabidopsis analysis.

Segmentation Overlay

Plant-level instance separation projected back onto the tray despite neighboring rosettes touching.

Rosette Fitted Models

Ellipse fits, convex hulls, and bounding geometry used to keep per-plant shapes stable under overlap.

Label Map

Integer plant labels for the full tray, useful for checking instance consistency across a crowded canopy.

Area Ranking

Rosette size spread across the tray, highlighting how overlap shifts apparent canopy size.

Height Distribution

ARKit-referenced height estimates relative to the tray baseline for the full Arabidopsis tray.

Area vs Height

Bubble chart showing how canopy area and 3D height interact across the touching rosette tray.

Per-Plant Trait Table

Full tray export from the package, including leaf count estimates, area, height, canopy hull area, voxel volume, solidity, circularity, and LiDAR support for each detected plant.

Plant	Leaves	Area (px²)	Height (m)	Canopy area (m²)	Voxel volume (m³)	Solidity	Circularity	LiDAR points
1	8	32597	0.0	0.0	0.0	0.6375	0.1238	0
2	6	25299	0.0	0.0	0.0	0.4822	0.0942	0
3	7	33347	0.1192	0.001018	7.4e-06	0.4605	0.0944	59
4	7	32488	0.1205	0.001492	2.73e-05	0.6312	0.1603	222
5	9	35159	0.1182	0.002555	2.44e-05	0.5581	0.0737	261
6	8	38267	0.1193	0.004708	4.18e-05	0.4701	0.0867	341
7	7	28115	0.119	0.004025	3.54e-05	0.4156	0.092	287
8	11	38164	0.1187	0.003987	5.09e-05	0.5613	0.0804	413
9	10	41810	0.1182	0.005967	3.81e-05	0.5809	0.0877	399
10	9	42502	0.1182	0.004835	5.06e-05	0.4905	0.0713	413
11	11	32242	0.1181	0.004824	3.03e-05	0.333	0.0637	246
12	6	30816	0.1196	0.004815	4.23e-05	0.4881	0.111	342
13	9	38288	0.1198	0.004933	3.06e-05	0.5072	0.103	335
14	10	42865	0.1186	0.00383	4.15e-05	0.5134	0.0754	340
15	10	35460	0.119	0.003351	3.05e-05	0.4727	0.0669	252
16	9	35480	0.1219	0.008571	5.96e-05	0.4799	0.1026	489
17	8	41763	0.1226	0.007072	8.18e-05	0.6266	0.0843	773
18	9	44337	0.1217	0.005823	9.01e-05	0.6624	0.1247	734
19	8	34746	0.1187	0.005093	8.36e-05	0.5879	0.0965	673
20	11	43850	0.1226	0.008864	0.0001456	0.6352	0.1118	1192

Heights use the ARKit world Y-axis relative to the tray baseline, voxel volume is an occupancy-based proxy, solidity is area divided by convex hull area, and leaf counts are peak-based estimates derived from rosette-mask topology.